Publications

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2017

In vivo mutation rates and the landscape of fitness costs of HIV-1
Fabio Zanini, Vadim Puller, Johanna Brodin, Jan Albert and Richard A. Neher
Virus Evol, 3 10.1093/ve/vex003 pdf bibtex Thu 02 March 2017

2016

Error rates, PCR recombination, and sampling depth in HIV-1 Whole Genome Deep Sequencing.
Fabio Zanini, Johanna Brodin, Jan Albert and Richard A. Neher
Virus research, 10.1016/j.virusres.2016.12.009 bibtex Tue 27 December 2016

Establishment and stability of the latent HIV-1 DNA reservoir.
Johanna Brodin, Fabio Zanini, Lina Thebo et al.
eLife, 5 10.7554/eLife.18889 pdf bibtex Tue 15 November 2016

2015

Population genomics of intrapatient HIV-1 evolution.
Fabio Zanini, Johanna Brodin, Lina Thebo et al.
eLife, 4 10.7554/eLife.11282 pdf bibtex Tue 15 December 2015

2013

Quantifying selection against synonymous mutations in HIV-1 env evolution.
Fabio Zanini and Richard A. Neher
Journal of virology, 87 11843--11850. 10.1128/JVI.01529-13 pdf bibtex Wed 28 August 2013

2012

FFPopSim: an efficient forward simulation package for the evolution of large populations.
Fabio Zanini and Richard A. Neher
Bioinformatics (Oxford, England), 28 3332--3333. 10.1093/bioinformatics/bts633 pdf bibtex Wed 24 October 2012