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Thu 03 August 2017Imprint

Fri 20 January 2017Post-Doc position in pathogen genomics

Sat 04 February 2017Master thesis: Reconstructing influenza spread and evolution jointly from all eight genome segments
Fri 03 February 2017Master thesis: Real-time tracking of animal influenza viruses

Mon 29 May 2017How hot are Mitochondria?
Tue 28 February 2017nextstrain wins the OpenSciencePrize!
Thu 01 December 2016Establishment and dynamics of the latent HIV-1 reservoir
Mon 17 October 2016Colistin resistance evolution
Wed 18 May 2016Does HIV evolve during therapy?
Sat 26 March 2016Mutation rates and fitness costs of HIV-1
Fri 11 March 2016Prediction of antigenic phenotypes of influenza viruses
Mon 14 December 2015Many aspects of intrapatient HIV-1 evolution are predictable
Tue 06 October 2015HI.nextflu.org visualizes antigenic evolution of influenza viruses
Mon 14 September 2015Recombination in HIV-1 and the "book" of genealogical trees
Tue 11 November 2014Now out in eLife: Predicting evolution
Thu 05 June 2014Is evolution predictable?
Thu 23 January 2014Abundant non-neutral variation in the nematode P. pacificus
Tue 05 November 2013Population genetics of rapid adaptation
Mon 09 September 2013Deleterious effects of synonymous mutations in HIV
Wed 07 August 2013Inferring HIV escape rates
Thu 01 August 2013Coalescence in sexual populations under selection

Tue 18 July 2017Incomplete inhibition of HIV infection results in more HIV infected lymph node cells by reducing cell death
Thu 22 June 2017TreeTime: maximum likelihood phylodynamic analysis
Mon 19 June 2017Rapid and consistent evolution of colistin resistance in XDR Pseudomonas aeruginosa during morbidostat culture
Wed 17 May 2017Temporal dynamics of gene expression and histone marks at the Arabidopsis shoot meristem during flowering
Fri 21 April 2017Estimating Time Of HIV-1 Infection From Next-Generation Sequence Diversity
Thu 02 March 2017In vivo mutation rates and the landscape of fitness costs of HIV-1
Tue 27 December 2016Error rates, PCR recombination, and sampling depth in HIV-1 Whole Genome Deep Sequencing.
Tue 15 November 2016Establishment and stability of the latent HIV-1 DNA reservoir.
Mon 29 August 2016panX: pan-genome analysis and exploration
Sun 19 June 2016Optimizing culture conditions for free-living stages of the nematode parasite Strongyloides ratti
Tue 15 March 2016HIV Cell-to-Cell Spread Results in Earlier Onset of Viral Gene Expression by Multiple Infections per Cell.
Mon 07 March 2016Prediction, dynamics, and visualization of antigenic phenotypes of seasonal influenza viruses.
Tue 26 January 2016Revisiting adult neurogenesis and the role of erythropoietin for neuronal and oligodendroglial differentiation in the hippocampus.
Tue 15 December 2015Population genomics of intrapatient HIV-1 evolution.
Fri 26 June 2015nextflu: real-time tracking of seasonal influenza virus evolution in humans.
Sun 15 March 2015Challenges with using primer IDs to improve accuracy of next generation sequencing.
Tue 11 November 2014Predicting evolution from the shape of genealogical trees.
Tue 01 April 2014Characterization of genetic diversity in the nematode Pristionchus pacificus from population-scale resequencing data.
Sat 15 March 2014Genetic diversity in the interference selection limit.
Wed 09 October 2013Genetic Draft, Selective Interference, and Population Genetics of Rapid Adaptation
Mon 09 September 2013Inferring HIV Escape Rates from Multi-Locus Genotype Data.
Tue 03 September 2013Coalescence and genetic diversity in sexual populations under selection.
Wed 28 August 2013Quantifying selection against synonymous mutations in HIV-1 env evolution.
Mon 19 August 2013Quantifying the range of a lipid phosphate signal in vivo.
Wed 16 January 2013Mathematical modeling of escape of HIV from cytotoxic T lymphocyte responses.
Wed 16 January 2013Emergence of clones in sexual populations
Tue 01 January 2013Genealogies of rapidly adapting populations.
Wed 24 October 2012FFPopSim: an efficient forward simulation package for the evolution of large populations.
Fri 03 August 2012Dynamic mutation-selection balance as an evolutionary attractor.
Fri 03 August 2012Estimating the strength of selective sweeps from deep population diversity data.
Fri 03 August 2012Fluctuations of fitness distributions and the rate of Muller's ratchet.
Thu 17 November 2011Target search on a dynamic DNA molecule.
Mon 01 August 2011Genetic draft and quasi-neutrality in large facultatively sexual populations.
Thu 24 February 2011Correlated evolution of nearby residues in Drosophilid proteins.
Mon 01 February 2010Rate of adaptation in large sexual populations.
Fri 29 January 2010Recombination rate and selection strength in HIV intra-patient evolution.
Wed 06 May 2009Blind source separation techniques for the decomposition of multiply labeled fluorescence images.
Thu 09 April 2009Competition between recombination and epistasis can cause a transition from allele to genotype selection.
Fri 03 August 2007Force-induced DNA slippage.
Fri 03 August 2007Optimal flexibility for conformational transitions in macromolecules.
Thu 03 August 2006Kinetic accessibility of buried DNA sites in nucleosomes.
Thu 03 August 2006Intermediate phase in DNA melting.
Wed 03 August 2005DNA as a programmable viscoelastic nanoelement.
Tue 03 August 2004Dynamics of force-induced DNA slippage.
Tue 01 June 2004Applying spectral fingerprinting to the analysis of FRET images.
Thu 01 January 2004Optimizing imaging parameters for the separation of multiple labels in a fluorescence image

Tue 10 January 2017Evolution of bacteria
Tue 10 January 2017HIV evolution
Tue 10 January 2017Influenza evolution
Tue 10 January 2017Theory

Mon 31 July 2017Evolution of HIV, immune escape, and latency
Wed 14 June 2017Real-time tracking of seasonal influenza, Ebola, and Zika viruses
Fri 09 June 2017Virus evolution and the predictability of next year's flu
Thu 25 May 2017Estimating the in-vivo fitness landscape of HIV-1
Thu 04 May 2017Virus evolution and the predictability of next year's flu
Wed 03 May 2017Within-host evolution of HIV
Tue 25 April 2017Tracking and predicting evolution and spread of RNA viruses
Wed 12 April 2017Virus evolution and the predictability of next year's flu
Mon 03 April 2017Population genetics of rapid adaptation and the predictability of evolution
Wed 29 March 2017Virus evolution and the predictability of next year's flu
Fri 17 March 2017The evolutionary dynamics of untreated HIV and the maintenance of the latent reservoir
Wed 08 March 2017Intra-patient evolution of HIV-1
Tue 28 February 2017Tracking and predicting the evolution RNA viruses
Tue 10 January 2017Evolution of HIV and influenza viruses
Tue 10 January 2017Population genetics of rapid adaptation and the predictability of evolution

Tue 20 June 2017Population genetics of rapid adaptation and the predictability of evolution
Thu 04 May 2017Virus evolution and the predictability of next year's flu

Mon 24 July 2017Eco-Evolutionary dynamics in Microbial Communities
Mon 24 July 2017Eco-Evolutionary dynamics in Microbial Communities
Mon 24 July 2017Eco-Evolutionary dynamics in Microbial Communities -- pan-genomes
Tue 04 April 2017Advanced Methods in Computational Sciences

Sat 07 January 2017Bianca Regenbogen
Sat 07 January 2017Emmanuel Benard
Sat 07 January 2017Fabio Zanini
Sat 07 January 2017Pavel Sagulenko
Sat 07 January 2017Richard Neher
Sat 07 January 2017Taylor Kessinger
Sat 07 January 2017Vadim Puller
Sat 07 January 2017Wei Ding